The pathway tool enables you to extract and visualise knowledge from the database to hypothesise possible relationships between potential signalling genes.
It has a search facility that allows you to select a number of Arabidopsis thaliana genes using the AGI numbers. This produces a 'pathway' which enables you to look at the regulation of genes in response to different treatments.
It is possible to see that certain groups of genes are always co-regulated suggesting that they are likely to occur in the same signal transduction pathway. An example of this is shown below:
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